Subject
Creator
- Phillip J. Wyss 10
- Phillip Wyss 4
- Xiaohui Carol Song 4
- Xiaohui Song 4
- Daidong Wang 2
- Xiaohui C. Song 2
- Elise Novorolsky 1
- Gregory E. Crawford 1
- Noorfatin J. Zulkefl 1
Type
- Dataset 17
Date
creator: Minou Bina, 0000-0001-6833-8698
Total is 17 Results
Density of ZFBS-Morph overlaps in the build hg19 of the human genome
10.4231/PR3C-J556
Minou Bina, 0000-0001-6833-8698 Phillip J. Wyss, Xiaohui Carol Song
05/30/2019
Supplementary material for the publication entitled “Discovering candidate imprinted genes and Imprinting Control Regions in the human genome” Bina M. bioRxiv (2019), doi: 10.1101/678151.
Chemistry Codes in Human DNA Gene Regulation Genomic imprinting Genomics Germline DMRs Human Genome ICRs MLL ZFP57
Localization of potential regulatory signals in the human genome
10.4231/R7V40S43
Minou Bina, 0000-0001-6833-8698 Phillip J. Wyss
08/13/2014
Discovering sequences with potential regulatory characteristics
Bioinformatics Chemistry Codes in Human DNA Gene Regulation Genetic Vocabulary Genomics Human Genome Regulatory Signals Sequence Context Transcription factor binding sites
Potential Transcription Factor Binding Sites in the Human Genome (hg19)
10.4231/R7JM27JN
Minou Bina, 0000-0001-6833-8698 Phillip J. Wyss
10/08/2014
Supplementary material for the article entitled “Discovering sequences with potential regulatory characteristics”. Bina M., Wyss P., et al. Genomics 93:314-22 (2009).
Binding Sites Chemistry Gene Regulation Human Genome TFBSs Transcription Transcription factor binding sites Transcription Factors
Occurrences of MLL1 morphemes in human cDNAs retrieved from GenBank
10.4231/R71834DW
Minou Bina, 0000-0001-6833-8698 Phillip J. Wyss
04/24/2015
Supplementary material for the publication entitled “Impact of the MLL1 Morphemes on Codon Utilization and Preservation in CpG Islands.” Bina, M, Wyss P. Biopolymers in press.
Biochemistry Bioinformatics Chemistry Coding sequences Codon bias Codon selection Codon utilization CpG islands Exon Exons Genomics Human Genome MLL1 morphemes in CDSs MLL1 morphemes in exons Morphemes MLL1 Overlapping codes Regulatory codes in DNA Trithorax response elements
Predicted regulatory signals in the human HOXA locus: supplemental material for the report: Discovering sequences with potential regulatory characteristics
10.4231/D3DZ03214
Gregory E. Crawford, Minou Bina, 0000-0001-6833-8698 Phillip J. Wyss, Sang P. Park, Sheryl A. Lazarus, Syed A. Shah, Wenhui Ren, Wojciech Szpankowski, Xiaohui C. Song
12/17/2013
Supplementary materials for the paper: Discovering sequences with potential regulatory characteristics. Bina M, Wyss P, Lazarus SA, Shah SR, Ren W, Szpankowski W, Crawford GE, Park SP, Song XC. Genomics. 2009 Apr;93(4):314-22
Binding-site Biochemistry Bioinformatics Codes in Human DNA DNASE-I hypersensitive sites Gene Regulation Genetic Vocabulary Human Genome Hypersensitive Sites Molecular Biosciences Promoter Regions Regulatory Signals Sequence Context Transcription factor binding sites Transcription Factors
The positions of ZFBS and ZFBS-Morph overlaps in the build bosTau8 of the Bos taurus genome
10.4231/K1SE-T951
Minou Bina, 0000-0001-6833-8698 Phillip Wyss, Xiaohui Song
12/20/2019
This project provides data for locating the positions of the ZFBS and ZFBS-morph overlaps in the build bosTau8 of the cow genome.
Chemistry Codes in DNA CpG-rich motifs DMRs Gene Regulation Genomic imprinting Germline DMRs ICR Imprinting Control Regions KMT2A MLL MLL1 MLL1 Binding Sites MLL1 morphemes ZFP57
Density of ZFBS-Morph overlaps in the build mm9 of the mouse genome
10.4231/R7W37TJH
Minou Bina, 0000-0001-6833-8698 Phillip J. Wyss, Xiaohui Carol Song
04/25/2018
Supplementary material for the publication entitled “Imprinted Control Regions include composite DNA elements consisting of the ZFP57 binding site overlapping MLL1 Morphemes” Bina M. Genomics, 109: 265–273 (2017).
Chemistry Codes in DNA DMRs Gene Regulation Genomic imprinting Germline DMRs ICRs Imprinting Control Regions
The positions of ZFBS and ZFBS-Morph overlaps in the build hg19 of the human genome
10.4231/SK8Y-EA21
Minou Bina, 0000-0001-6833-8698 Phillip J. Wyss, Xiaohui Carol Song
05/30/2019
Supplementary material for the publication entitled “Discovering candidate imprinted genes and Imprinting Control Regions in the human genome” Bina M. bioRxiv (2019), doi: 10.1101/678151.
Chemistry Codes in Human DNA Gene Regulation Genomic imprinting Genomics Human Genome MLL ZFP57
An overview of peak positions –in plots of ZFBS-morph-overlap density– with respect to known ICRs/gDMRs in the mouse genome
10.4231/32C9-G644
Minou Bina, 0000-0001-6833-8698
06/04/2020
Supplementary material for the publication entitled “Simultaneous discovery of candidate imprinted genes and Imprinting Control Regions in the mouse genome” Bina M., and Wyss P. bioRxiv doi: https://doi.org/10.1101/780551 (2019).
Chemistry DMRs Gene Regulation Genomic imprinting Germline DMRs ICRs Imprinting Control Regions Mammalian genomes Mouse genome ZFP57
Positions of known ICRs/gDMRs with respect to peaks in plots of ZFBS-morph-overlap density in the mouse genome
10.4231/V87T-4X79
Minou Bina, 0000-0001-6833-8698
06/04/2020
Supplementary material for the publication entitled “Simultaneous discovery of candidate imprinted genes and Imprinting Control Regions in the mouse genome” Bina M., and Wyss P. bioRxiv doi: https://doi.org/10.1101/780551 (2019).
Binding Sites Chemistry DMRs Gene Regulation Genomic imprinting Germline DMRs ICRs Imprinting Control Regions Mammalian genomes MLL1 morphemes Mouse genome ZFP57
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Results 1 - 10 of 17